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  5. Spa_g12970

Spa_g12970


Description : not classified & original description: none


Gene families : OG0006772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12970
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0163.g054235 No alias not classified & original description: CDS=96-827 0.03 OrthoFinder output from all 47 species
Azfi_s2310.g110393 No alias not classified & original description: CDS=96-827 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020904.46 No alias Uncharacterized protein At5g50100, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre03.g145587 No alias Uncharacterized protein At5g50100, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g21210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007814001 No alias Uncharacterized protein At5g50100, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os04g57310.1 LOC_Os04g57310 Uncharacterized protein At5g50100, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g19772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11229 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g113990.3.1 Solyc03g113990 Uncharacterized protein At5g50100, chloroplastic... 0.05 OrthoFinder output from all 47 species
Zm00001e041886_P001 Zm00001e041886 Uncharacterized protein At5g50100, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015035 protein-disulfide reductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR007263 DCC1-like 87 197
No external refs found!