Spa_g12965


Description : small subunit of methylthioalkylmalate isomerase & original description: none


Gene families : OG0004189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004189_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12965

Target Alias Description ECC score Gene Family Method Actions
Adi_g018696 No alias small subunit of methylthioalkylmalate isomerase &... 0.04 OrthoFinder output from all 47 species
Ala_g01143 No alias small subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013714 No alias small subunit of methylthioalkylmalate isomerase &... 0.04 OrthoFinder output from all 47 species
Cba_g30259 No alias small subunit of methylthioalkylmalate isomerase &... 0.02 OrthoFinder output from all 47 species
Cba_g68573 No alias small subunit of methylthioalkylmalate isomerase &... 0.04 OrthoFinder output from all 47 species
LOC_Os02g43830.1 LOC_Os02g43830 small subunit of isopropylmalate isomerase heterodimer.... 0.04 OrthoFinder output from all 47 species
Msp_g00985 No alias small subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Ppi_g43579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05068 No alias small subunit of methylthioalkylmalate isomerase &... 0.1 OrthoFinder output from all 47 species
Sam_g06110 No alias small subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 140 191
No external refs found!