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  5. Spa_g12920

Spa_g12920 (PAT1)


Aliases : PAT1

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12920
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Dac_g06827 PAT1 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g13520 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19426 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01366 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10420 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27471 PAT1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10472 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19109 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11765 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55042 PAT1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007649 SCL5 GRAS-type transcription factor & original description: CDS=1-2229 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005202 TF_GRAS 240 608
No external refs found!