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  5. Spa_g12823

Spa_g12823


Description : pre-40S ribosomal subunit assembly factor *(UTP22) & original description: none


Gene families : OG0006078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12823

Target Alias Description ECC score Gene Family Method Actions
Cba_g13464 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01018952001 No alias No description available 0.03 OrthoFinder output from all 47 species
Mp6g08990.1 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.02 OrthoFinder output from all 47 species
Zm00001e018445_P001 Zm00001e018445 pre-40S ribosomal subunit assembly factor (UTP22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR035369 Nrap_D4 555 748
IPR035368 Nrap_D3 383 534
IPR035082 Nrap_D1 98 231
IPR035370 Nrap_D5 751 900
IPR035371 Nrap_D6 916 1051
IPR035367 Nrap_D2 237 377
No external refs found!