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  5. Spa_g12730

Spa_g12730 (SRO1)


Aliases : SRO1

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12730
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AT1G23550 SRO2 similar to RCD one 2 0.03 OrthoFinder output from all 47 species
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.03 OrthoFinder output from all 47 species
AT2G35510 SRO1 similar to RCD one 1 0.03 OrthoFinder output from all 47 species
AT5G62520 SRO5 similar to RCD one 5 0.03 OrthoFinder output from all 47 species
Ceric.15G016800.1 SRO2, Ceric.15G016800 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01007754001 SRO5 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species
MA_5033617g0010 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0060632 regulation of microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 305 400
IPR022003 RST 490 554
IPR004170 WWE-dom 58 112
No external refs found!