Spa_g12670

Description : mRNA endoribonuclease *(G3BP) & original description: none

Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g12670

Target	Alias	Description	ECC score	Gene Family Method
Ala_g02233	No alias	mRNA endoribonuclease *(G3BP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g11149	No alias	mRNA endoribonuclease *(G3BP) & original description: none	0.02	OrthoFinder output from all 47 species
Cre02.g092400	No alias	No description available	0.01	OrthoFinder output from all 47 species
Ehy_g03626	No alias	mRNA endoribonuclease *(G3BP) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g11984	No alias	mRNA endoribonuclease *(G3BP) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g04096	No alias	mRNA endoribonuclease *(G3BP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e022613_P001	Zm00001e022613	mRNA endoribonuclease (G3BP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	325	390
IPR002075	NTF2_dom	19	137

External Links

No external refs found!