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  5. Spa_g12623

Spa_g12623


Description : not classified & original description: none


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12623

Target Alias Description ECC score Gene Family Method Actions
Adi_g055076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G014800.1 Ceric.34G014800 not classified & original description: pacid=50622851... 0.03 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Smo75198 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 10 263
IPR006876 LMBR1-like_membr_prot 280 491
No external refs found!