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  5. Spa_g12554

Spa_g12554 (RCI3, RCI3A)


Aliases : RCI3, RCI3A

Description : not classified & original description: none


Gene families : OG0000013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12554

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00179670 evm_27.TU.AmTr_v1... Peroxidase 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00037p00030970 evm_27.TU.AmTr_v1... Peroxidase 39 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00144120 evm_27.TU.AmTr_v1... Peroxidase 25 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00148870 evm_27.TU.AmTr_v1... Peroxidase 31 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00041780 evm_27.TU.AmTr_v1... Peroxidase 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00041940 evm_27.TU.AmTr_v1... Peroxidase 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00157p00074830 evm_27.TU.AmTr_v1... Peroxidase 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G44970 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G28200 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G42180 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g088193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19836 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g30096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12887.t1 Aspi01Gene12887 endodermis-specific peroxidase (PER64) involved in... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31393.t1 PA2, ATPA2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58306.t1 Aspi01Gene58306 endodermis-specific peroxidase (PER64) involved in... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63050.t1 Aspi01Gene63050 lignin peroxidase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63051.t1 Aspi01Gene63051 lignin peroxidase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051634 No alias not classified & original description: CDS=91-1089 0.03 OrthoFinder output from all 47 species
Azfi_s1162.g098549 No alias not classified & original description: CDS=1-954 0.04 OrthoFinder output from all 47 species
Cba_g00675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13059 RCI3, RCI3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G096800.1 Ceric.01G096800 not classified & original description: pacid=50592756... 0.03 OrthoFinder output from all 47 species
Ceric.09G044200.1 Ceric.09G044200 not classified & original description: pacid=50588459... 0.04 OrthoFinder output from all 47 species
Ceric.18G033100.1 Ceric.18G033100 not classified & original description: pacid=50621530... 0.03 OrthoFinder output from all 47 species
Dac_g21212 No alias endodermis-specific peroxidase (PER64) involved in... 0.05 OrthoFinder output from all 47 species
Dac_g40392 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19315 PA2, ATPA2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18447 PA2, ATPA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19488 No alias endodermis-specific peroxidase (PER64) involved in... 0.03 OrthoFinder output from all 47 species
Ehy_g30181 No alias endodermis-specific peroxidase (PER64) involved in... 0.02 OrthoFinder output from all 47 species
GSVIVT01004088001 No alias Peroxidase 5 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01010266001 No alias Lignin-forming anionic peroxidase OS=Nicotiana sylvestris 0.02 OrthoFinder output from all 47 species
GSVIVT01025374001 No alias Peroxidase 54 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030616001 No alias Peroxidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00476 No alias Peroxidase 51 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_03365 No alias lignin peroxidase 0.03 OrthoFinder output from all 47 species
Gb_05514 No alias lignin peroxidase 0.03 OrthoFinder output from all 47 species
Gb_18532 RCI3, RCI3A Peroxidase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34423 No alias Peroxidase 51 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02939.1 RCI3, RCI3A,... Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 338.0) 0.02 OrthoFinder output from all 47 species
LOC_Os03g13200.1 PA2, ATPA2,... Peroxidase 15 OS=Ipomoea batatas (sp|q9leh3|per15_ipoba : 377.0) 0.02 OrthoFinder output from all 47 species
LOC_Os03g25280.1 LOC_Os03g25280 Peroxidase 2 OS=Zea mays (sp|q9feq8|per2_maize : 366.0) 0.02 OrthoFinder output from all 47 species
LOC_Os04g39100.1 LOC_Os04g39100 Peroxidase 65 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g56180.1 LOC_Os04g56180 Peroxidase 16 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04470.1 LOC_Os05g04470 Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 278.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g46799.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48030.1 LOC_Os06g48030 Peroxidase 16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g42030.1 LOC_Os08g42030 Peroxidase 73 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39170.1 RCI3, RCI3A,... Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 296.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g43980.1 RCI3, RCI3A,... Peroxidase 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g09289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11257 No alias lignin peroxidase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425995g0010 PA2, ATPA2 Peroxidase 53 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433993g0010 No alias Peroxidase 72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_125874g0020 No alias Peroxidase 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_166754g0010 No alias lignin peroxidase 0.03 OrthoFinder output from all 47 species
MA_195775g0010 No alias Peroxidase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_54671g0010 No alias Peroxidase 35 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_62726g0010 No alias Peroxidase 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_93867g0010 No alias Cationic peroxidase 2 OS=Arachis hypogaea... 0.02 OrthoFinder output from all 47 species
MA_9573747g0010 PA2, ATPA2 Peroxidase 53 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g03340.1 PA2, ATPA2 Peroxidase 51 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g20400.1 No alias Peroxidase 22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g03520.1 No alias Peroxidase 45 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g11550.1 No alias Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 273.0) 0.02 OrthoFinder output from all 47 species
Mp7g13980.1 No alias Peroxidase 25 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g00676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06093 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37507 No alias endodermis-specific peroxidase (PER64) involved in... 0.04 OrthoFinder output from all 47 species
Ore_g43137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c3_21170V3.1 Pp3c3_21170 Peroxidase superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g08096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61991 No alias lignin peroxidase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010266 No alias not classified & original description: CDS=246-1025 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013952 No alias not classified & original description: CDS=893-1945 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025236 No alias not classified & original description: CDS=46-1287 0.03 OrthoFinder output from all 47 species
Smo104905 RHS19 Peroxidase 51 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo132865 No alias Peroxidase 5 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Smo230146 No alias Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
Smo232728 No alias Peroxidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo233332 RCI3, RCI3A Peroxidase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo233807 No alias Peroxidase P7 OS=Brassica rapa subsp. rapa 0.03 OrthoFinder output from all 47 species
Smo269862 No alias Peroxidase 51 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo407109 No alias Peroxidase 56 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g083480.3.1 Solyc02g083480 Peroxidase 64 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g087190.1.1 Solyc02g087190 Peroxidase 63 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g046000.4.1 Solyc05g046000 Peroxidase 27 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g082420.4.1 Solyc06g082420 Cationic peroxidase 1 OS=Arachis hypogaea... 0.04 OrthoFinder output from all 47 species
Solyc10g078890.2.1 PA2, ATPA2,... Peroxidase 15 OS=Ipomoea batatas (sp|q9leh3|per15_ipoba : 400.0) 0.02 OrthoFinder output from all 47 species
Solyc12g005370.2.1 Solyc12g005370 Peroxidase 27 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g096530.1.1 Solyc12g096530 Peroxidase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g13444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000157_P002 RCI3, RCI3A,... Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 317.0) 0.03 OrthoFinder output from all 47 species
Zm00001e010127_P001 RHS19, Zm00001e010127 Peroxidase 73 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e013034_P003 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014346_P002 Zm00001e014346 Peroxidase 52 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e017551_P001 RCI3, RCI3A,... Peroxidase 1 OS=Zea mays (sp|a5h8g4|per1_maize : 558.0) 0.02 OrthoFinder output from all 47 species
Zm00001e024917_P001 Zm00001e024917 Peroxidase 70 OS=Zea mays (sp|a5h452|per70_maize : 367.0) 0.02 OrthoFinder output from all 47 species
Zm00001e025182_P001 RCI3, RCI3A,... Peroxidase 39 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e026378_P001 Zm00001e026378 lignin peroxidase 0.03 OrthoFinder output from all 47 species
Zm00001e031018_P001 Zm00001e031018 Peroxidase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e032043_P001 RCI3, RCI3A,... Peroxidase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e032651_P001 Zm00001e032651 Peroxidase 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037140_P001 Zm00001e037140 Peroxidase 52 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
BP GO:0006979 response to oxidative stress IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 50 295
No external refs found!