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  5. Spa_g12543

Spa_g12543 (EDA32)


Aliases : EDA32

Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12543

Target Alias Description ECC score Gene Family Method Actions
AT3G62210 EDA32 Putative endonuclease or glycosyl hydrolase 0.03 OrthoFinder output from all 47 species
Aop_g13658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g06680.2 LOC_Os11g06680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10350 EDA32 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19093 EDA32 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo420662 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g13705 EDA32 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
CC GO:0070176 DRM complex IEP HCCA
CC GO:0090571 RNA polymerase II transcription repressor complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 10 147
IPR025605 OST-HTH/LOTUS_dom 786 841
IPR025605 OST-HTH/LOTUS_dom 557 620
No external refs found!