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  5. Spa_g12491

Spa_g12491 (AMY3, ATAMY3)


Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12491
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g022283 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11181 AMY2, ATAMY2 alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g25510.1 AMY1, ATAMY1,... Alpha-amylase isozyme C OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os02g52710.1 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species
LOC_Os06g49970.2 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species
LOC_Os09g28400.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
LOC_Os09g28420.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
MA_217935g0010 AMY1, ATAMY1 alpha amylase 0.03 OrthoFinder output from all 47 species
Sam_g16056 No alias alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007070.2.1 AMY3, ATAMY3,... alpha amylase 0.02 OrthoFinder output from all 47 species
Zm00001e009946_P001 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Zm00001e015947_P002 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 1063 1125
IPR006047 Glyco_hydro_13_cat_dom 763 1042
No external refs found!