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  5. Spa_g12198

Spa_g12198


Description : regulatory protein *(CBP60) of systemic acquired resistance & original description: none


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00168160 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 D OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g13430 No alias regulatory protein *(CBP60) of systemic acquired... 0.05 OrthoFinder output from all 47 species
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g27170.1 LOC_Os08g27170 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g44200.1 LOC_Os11g44200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g44680.1 LOC_Os11g44680 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g44700.1 LOC_Os11g44700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g36910.1 LOC_Os12g36910 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36920.1 LOC_Os12g36920 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36940.1 LOC_Os12g36940 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g11890 No alias regulatory protein *(CBP60) of systemic acquired... 0.05 OrthoFinder output from all 47 species
Solyc03g113980.3.1 Solyc03g113980 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g036390.2.1 Solyc12g036390 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004278_P001 Zm00001e004278 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039693_P002 Zm00001e039693 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
InterPro domains Description Start Stop
IPR046830 Calmod_bind_M 245 304
IPR046829 Calmod_bind_C 309 366
IPR046831 Calmodulin_bind_N 81 229
No external refs found!