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  5. Spa_g12070

Spa_g12070


Description : miRNA uridylyltransferase *(URT1) & original description: none


Gene families : OG0002070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12070

Target Alias Description ECC score Gene Family Method Actions
Cre14.g612150 No alias Protein HESO1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01022387001 No alias Protein HESO1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os08g44560.1 LOC_Os08g44560 Protein HESO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g16757 No alias miRNA uridylyltransferase *(HESO1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36401 No alias miRNA uridylyltransferase *(HESO1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_24146g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g12587 No alias miRNA uridylyltransferase *(URT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32754 No alias miRNA uridylyltransferase *(HESO1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!