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  5. Spa_g11472

Spa_g11472 (AT-GT2, GT2)


Aliases : AT-GT2, GT2

Description : not classified & original description: none


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11472

Target Alias Description ECC score Gene Family Method Actions
Adi_g063546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087396 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10713 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G042300.1 Ceric.21G042300 not classified & original description: pacid=50604353... 0.04 OrthoFinder output from all 47 species
Ehy_g07765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g15240.1 emb2746 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g17235 AT-GT2, GT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 385 467
IPR044822 Myb_DNA-bind_4 122 204
No external refs found!