Spa_g11372 (RAB2A, AT-RAB2,...)

Aliases : RAB2A, AT-RAB2, RAB-B1B, ATRAB-B1B, RABB1C, ATRABB1C, ATRAB2A

Description : B-class RAB GTPase & original description: none

Gene families : OG0001412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g11372

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055675	RAB2A, AT-RAB2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001001.25	RAB2A, AT-RAB2,...	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Ehy_g05381	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g34111	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc10g007700.3.1	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.05	OrthoFinder output from all 47 species
Tin_g05857	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e014961_P003	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	168

External Links

No external refs found!