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  5. Spa_g11312

Spa_g11312 (SS2, AtSS2)


Aliases : SS2, AtSS2

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11312

Target Alias Description ECC score Gene Family Method Actions
AT3G01180 SS2, AtSS2 starch synthase 2 0.05 OrthoFinder output from all 47 species
Aspi01Gene30910.t1 SSI1, ATSS1,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29973 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G059800.1 SS2, AtSS2,... not classified & original description: pacid=50634171... 0.02 OrthoFinder output from all 47 species
LOC_Os02g51070.1 SS2, AtSS2,... starch synthase (SSII) 0.02 OrthoFinder output from all 47 species
Mp3g25350.1 SSI1, ATSS1, SSI starch synthase (SSI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 568 710
IPR013534 Starch_synth_cat_dom 268 511
No external refs found!