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  5. Spa_g11278

Spa_g11278 (RPH1)


Aliases : RPH1

Description : not classified & original description: none


Gene families : OG0006050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11278
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT2G48070 RPH1 resistance to phytophthora 1 0.05 OrthoFinder output from all 47 species
Adi_g077594 RPH1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g077595 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24131 RPH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04605 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11899 RPH1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g22056 RPH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08928 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G048800.1 RPH1, Ceric.20G048800 not classified & original description: pacid=50567321... 0.04 OrthoFinder output from all 47 species
Cre03.g145207 RPH1 No description available 0.04 OrthoFinder output from all 47 species
Dac_g24608 RPH1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g11977 RPH1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g38855 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06539 RPH1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01011060001 RPH1 No description available 0.06 OrthoFinder output from all 47 species
LOC_Os05g33520.1 RPH1, LOC_Os05g33520 no description available(sp|m1c5m7|rph1_soltu : 245.0) 0.04 OrthoFinder output from all 47 species
Len_g11954 RPH1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Mp3g10840.1 RPH1 no description available(sp|q9zu82|rph1_arath : 223.0) 0.02 OrthoFinder output from all 47 species
Ore_g14460 RPH1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g18881 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15587 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017006 RPH1 not classified & original description: CDS=688-1419 0.03 OrthoFinder output from all 47 species
Smo165828 RPH1 No description available 0.02 OrthoFinder output from all 47 species
Solyc05g055850.3.1 RPH1, Solyc05g055850 no description available(sp|m1c5m7|rph1_soltu : 397.0) 0.07 OrthoFinder output from all 47 species
Zm00001e031640_P002 RPH1, Zm00001e031640 no description available(sp|m1c5m7|rph1_soltu : 241.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!