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  5. Spa_g11171

Spa_g11171 (MCCA)


Aliases : MCCA

Description : EC_6.4 ligase forming carbon-carbon bond & original description: none


Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11171
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT1G03090 MCCA methylcrotonyl-CoA carboxylase alpha chain,... 0.04 OrthoFinder output from all 47 species
Cre06.g278098 MCCA Amino acid metabolism.degradation.branched-chain amino... 0.06 OrthoFinder output from all 47 species
LOC_Os12g41250.1 MCCA, LOC_Os12g41250 subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.05 OrthoFinder output from all 47 species
Mp8g15290.1 MCCA subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.02 OrthoFinder output from all 47 species
Solyc09g065540.3.1 MCCA, Solyc09g065540 subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.03 OrthoFinder output from all 47 species
Zm00001e003196_P001 MCCA, Zm00001e003196 subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR045774 MCCA_BT_dom 502 634
IPR005481 BC-like_N 49 157
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 162 370
IPR005482 Biotin_COase_C 384 492
IPR000089 Biotin_lipoyl 668 733
No external refs found!