AMTR_s00096p00105250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00096.64

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG_01_0000096 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000096_tree ,
OG_02_0000636 (LandPlants) Phylogenetic Tree(s): OG_02_0000636_tree ,
OG_03_0001748 (SeedPlants) Phylogenetic Tree(s): OG_03_0001748_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00105250
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250890 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00085p00112760 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 Archaeplastida
AT1G10640 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT1G65570 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G14650 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.04 Archaeplastida
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032118001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01033303001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
Gb_12008 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 Archaeplastida
Gb_12018 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g59330.1 No alias polygalacturonase (QRT2) 0.03 Archaeplastida
LOC_Os05g20020.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_427851g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.02 Archaeplastida
MA_640601g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo78038 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
Solyc02g067640.3.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
Solyc04g008230.3.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc08g014540.1.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Solyc08g014560.3.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Solyc12g019120.2.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Solyc12g019140.3.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e017565_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026600_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027946_P001 No alias polygalacturonase (PGX1) 0.02 Archaeplastida
AMTR_s00003p00197210 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 LandPlants
AMTR_s00085p00112760 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 LandPlants
AT1G10640 No alias Pectin lyase-like superfamily protein 0.04 LandPlants
AT5G14650 No alias Pectin lyase-like superfamily protein 0.04 LandPlants
GSVIVT01028132001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_13004 No alias polygalacturonase (PGX1) 0.02 LandPlants
LOC_Os05g20020.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_101764g0010 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_640601g0010 No alias no hits & (original description: none) 0.03 LandPlants
Smo78038 No alias Cell wall.pectin.modification and... 0.03 LandPlants
Solyc01g100980.4.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc04g008230.3.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e017565_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e027946_P001 No alias polygalacturonase (PGX1) 0.02 LandPlants
AT1G10640 No alias Pectin lyase-like superfamily protein 0.04 SeedPlants
AT5G14650 No alias Pectin lyase-like superfamily protein 0.02 SeedPlants
Gb_13004 No alias polygalacturonase (PGX1) 0.02 SeedPlants
MA_640601g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e027946_P001 No alias polygalacturonase (PGX1) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 6 223
No external refs found!