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  5. Spa_g10909

Spa_g10909 (VPS60.1)


Aliases : VPS60.1

Description : associated protein of ESCRT-III complex *(VPS60) & original description: none


Gene families : OG0002554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10909
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT3G10640 VPS60.1 SNF7 family protein 0.05 OrthoFinder output from all 47 species
Azfi_s0099.g044098 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Cba_g10454 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.02 OrthoFinder output from all 47 species
Gb_31938 VPS60.1 VPS60 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Zm00001e029711_P001 VPS60.1, Zm00001e029711 VPS60 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 206
No external refs found!