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  5. Spa_g10771

Spa_g10771 (TTN7, SMC3)


Aliases : TTN7, SMC3

Description : component *(SMC3/TTN7) of cohesin regulator complex & original description: none


Gene families : OG0003981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10771

Target Alias Description ECC score Gene Family Method Actions
AT2G27170 TTN7, SMC3 Structural maintenance of chromosomes (SMC) family protein 0.02 OrthoFinder output from all 47 species
Adi_g076982 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Aob_g19956 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0147.g053026 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.46 TTN7, SMC3 Structural maintenance of chromosomes protein 3... 0.02 OrthoFinder output from all 47 species
Dac_g05785 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g09520 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033181001 TTN7, SMC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
LOC_Os02g04040.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g04050.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Lfl_g04244 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.05 OrthoFinder output from all 47 species
MA_463997g0010 TTN7, SMC3 Structural maintenance of chromosomes protein 3... 0.05 OrthoFinder output from all 47 species
Sam_g08063 No alias component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Solyc06g073780.4.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Tin_g03549 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e032592_P001 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR010935 SMC_hinge 522 634
IPR003395 RecF/RecN/SMC_N 2 1181
No external refs found!