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  5. Spa_g10758

Spa_g10758 (MSL4)


Aliases : MSL4

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10758

Target Alias Description ECC score Gene Family Method Actions
Aop_g09653 No alias mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009367 MSL6 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17637 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008726001 No alias Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
Lfl_g28112 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015319 MSL5 mechanosensitive ion channel *(MSL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g47206 No alias mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species
Tin_g11582 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e007259_P002 Zm00001e007259 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Zm00001e036222_P001 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Zm00001e041490_P001 Zm00001e041490 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 730 934
No external refs found!