Spa_g10638


Description : not classified & original description: none


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10638

Target Alias Description ECC score Gene Family Method Actions
Aev_g49491 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g07926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08553 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g27219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
Dcu_g10069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g62510.1 LOC_Os03g62510 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.09 OrthoFinder output from all 47 species
Lfl_g05426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.07 OrthoFinder output from all 47 species
Solyc05g010180.4.1 Solyc05g010180 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.05 OrthoFinder output from all 47 species
Spa_g07332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA

No InterPro domains available for this sequence

No external refs found!