1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g10565

Spa_g10565


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10565

Target Alias Description ECC score Gene Family Method Actions
Adi_g039742 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14817.t1 Aspi01Gene14817 E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene43421.t1 Aspi01Gene43421 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024585 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-897 0.04 OrthoFinder output from all 47 species
Ceric.19G013000.1 Ceric.19G013000 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.21 OrthoFinder output from all 47 species
Ceric.20G005100.1 Ceric.20G005100 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.25 OrthoFinder output from all 47 species
LOC_Os02g42690.3 LOC_Os02g42690 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os04g44820.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g01102 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.12 OrthoFinder output from all 47 species
Len_g03115 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.17 OrthoFinder output from all 47 species
Nbi_g12014 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.25 OrthoFinder output from all 47 species
Nbi_g13792 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.25 OrthoFinder output from all 47 species
Ppi_g62388 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.11 OrthoFinder output from all 47 species
Solyc02g078320.3.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g010670.1.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 61 101
No external refs found!