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  5. Spa_g10462

Spa_g10462 (PUB14, ATPUB14)


Aliases : PUB14, ATPUB14

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10462
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT3G46510 PUB13, ATPUB13 plant U-box 13 0.02 OrthoFinder output from all 47 species
Adi_g054040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083407 PUB13, ATPUB13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03944 PUB12, AtPUB12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59240.t1 PUB14, ATPUB14,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g09348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07071 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB15) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g02800 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13215 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Len_g00426 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01498 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06567 PUB15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07136 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11295 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g114160.1.1 Solyc03g114160 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Tin_g07352 ATPUB17, PUB17 E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019429_P001 Zm00001e019429 U-box domain-containing protein 16 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!