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  5. Spa_g10445

Spa_g10445 (TSB2)


Aliases : TSB2

Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10445

Target Alias Description ECC score Gene Family Method Actions
AT5G54810 TRP2, TSB1, ATTSB1, TRPB tryptophan synthase beta-subunit 1 0.01 OrthoFinder output from all 47 species
Dcu_g09676 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012644001 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.04 OrthoFinder output from all 47 species
LOC_Os08g04180.1 TSB2, LOC_Os08g04180 subunit beta of tryptophan synthase complex 0.03 OrthoFinder output from all 47 species
Solyc10g018380.3.1 Solyc10g018380 Tryptophan synthase beta chain 2, chloroplastic... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 72 399
No external refs found!