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  5. Spa_g10422

Spa_g10422 (BRH1)


Aliases : BRH1

Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10422
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G49210 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G24015 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G41400 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.04 OrthoFinder output from all 47 species
Als_g02285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g06652 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46829.t2 Aspi01Gene46829 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g49099 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G057800.1 ATL6, Ceric.07G057800 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G021100.1 Ceric.22G021100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g16663 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g37746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14526 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g28080.1 ATL3, LOC_Os03g28080 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os12g24490.1 LOC_Os12g24490 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g23800 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431161g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431746g0020 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_41514g0010 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g06664 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09567 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10431 XERICO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14691 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g26608 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g44046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18570 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017128 No alias not classified & original description: CDS=1-1311 0.03 OrthoFinder output from all 47 species
Solyc06g007230.2.1 ATL2, TL2, Solyc06g007230 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015470_P001 ATL8, Zm00001e015470 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e041409_P001 BRH1, Zm00001e041409 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 161
No external refs found!