Spa_g10215 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10215

Target Alias Description ECC score Gene Family Method Actions
AT1G17700 PRA1.F1 prenylated RAB acceptor 1.F1 0.03 OrthoFinder output from all 47 species
Als_g42889 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01011 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12508 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68953.t1 PRA1.B1, Aspi01Gene68953 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G040500.1 PRA1.B2, Ceric.39G040500 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08868 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00567 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434486g0010 PRA7, PRA1.F2 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011117 PRA1.B4 B-G-class Rab-GDF protein & original description: CDS=1-600 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014691 PRA1.B2 B-G-class Rab-GDF protein & original description: CDS=1-618 0.03 OrthoFinder output from all 47 species
Spa_g10214 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11088 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33421 PRA1.B5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18034 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 43 181
No external refs found!