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  5. Spa_g10167

Spa_g10167


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00116980 evm_27.TU.AmTr_v1... U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g11530 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20620.t1 Aspi01Gene20620 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48176.t1 Aspi01Gene48176 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64526.t1 Aspi01Gene64526 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g01655 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04419 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19335 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32791 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18992 No alias E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!