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  5. Spa_g10046

Spa_g10046


Description : component *(PININ) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0004599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10046
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00035440 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.05 OrthoFinder output from all 47 species
Als_g09559 No alias component *(PININ) of RNA quality control Exon Junction... 0.1 OrthoFinder output from all 47 species
Aop_g19581 No alias component *(PININ) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Aspi01Gene37717.t1 Aspi01Gene37717 component *(PININ) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Azfi_s0060.g034798 No alias component *(PININ) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cba_g11411 No alias component *(PININ) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Ceric.07G024200.1 Ceric.07G024200 component *(PININ) of RNA quality control Exon Junction... 0.07 OrthoFinder output from all 47 species
Dcu_g48542 No alias component *(PININ) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dde_g12214 No alias component *(PININ) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Gb_25266 No alias component PININ of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Gb_25268 No alias component PININ of RNA quality control Exon Junction complex 0.05 OrthoFinder output from all 47 species
LOC_Os03g49520.1 LOC_Os03g49520 component PININ of RNA quality control Exon Junction complex 0.07 OrthoFinder output from all 47 species
Lfl_g08493 No alias component *(PININ) of RNA quality control Exon Junction... 0.07 OrthoFinder output from all 47 species
MA_49744g0010 No alias component PININ of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Mp4g01130.1 No alias component PININ of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Msp_g05858 No alias component *(PININ) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Pir_g08174 No alias component *(PININ) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ppi_g15018 No alias component *(PININ) of RNA quality control Exon Junction... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0222.g026245 No alias component *(PININ) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Sam_g19689 No alias component *(PININ) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Solyc01g104560.3.1 Solyc01g104560 component PININ of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Tin_g10098 No alias component *(PININ) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Zm00001e005379_P001 Zm00001e005379 component PININ of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Zm00001e012229_P001 Zm00001e012229 component PININ of RNA quality control Exon Junction complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006786 Pinin_SDK_MemA 171 298
No external refs found!