1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g09906

Spa_g09906 (TIR1)


Aliases : TIR1

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09906

Target Alias Description ECC score Gene Family Method Actions
Aop_g29642 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
MA_263909g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Nbi_g04904 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 117 164
IPR001611 Leu-rich_rpt 532 551
IPR001611 Leu-rich_rpt 206 226
IPR041567 COI1_F-box 59 97
No external refs found!