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  5. Spa_g09827

Spa_g09827


Description : storage vacuole protein sorting receptor *(RMR) & original description: none


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09827

Target Alias Description ECC score Gene Family Method Actions
AT1G71980 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g014935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02431 No alias storage vacuole protein sorting receptor *(RMR) &... 0.04 OrthoFinder output from all 47 species
Aop_g00557 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07230.t1 Aspi01Gene07230 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31287.t1 Aspi01Gene31287 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0221.g058716 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Cba_g69658 No alias storage vacuole protein sorting receptor *(RMR) &... 0.04 OrthoFinder output from all 47 species
Dac_g10108 No alias storage vacuole protein sorting receptor *(RMR) &... 0.04 OrthoFinder output from all 47 species
Gb_12300 No alias vacuolar sorting receptor (RMR) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015307 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 230 273
IPR003137 PA_domain 81 142
No external refs found!