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  5. Spa_g09720

Spa_g09720


Description : C2H2 subclass Di19 transcription factor & original description: none


Gene families : OG0000852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09720
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G56280 DI19, ATDI19 drought-induced 19 0.04 OrthoFinder output from all 47 species
Adi_g011337 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g081999 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g12288 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g05769 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Gb_18994 No alias Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Msp_g05028 HRB1 C2H2 subclass Di19 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pnu_g19368 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g14089 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g05663 No alias C2H2 subclass Di19 transcription factor & original... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027935 Di19_C 120 229
IPR008598 Di19_Zn-bd 44 96
No external refs found!