1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g09555

Spa_g09555 (ATPRFB, HCF109)


Aliases : ATPRFB, HCF109

Description : translation peptide chain release factor *(PrfB) & original description: none


Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09555

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00184560 ATPRFB, HCF109,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT3G57190 No alias peptide chain release factor, putative 0.03 OrthoFinder output from all 47 species
Aspi01Gene23944.t1 ATPRFB, HCF109,... translation peptide chain release factor *(PrfB) &... 0.04 OrthoFinder output from all 47 species
Cba_g23243 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Ceric.36G013000.1 ATPRFB, HCF109,... translation peptide chain release factor *(PrfB) &... 0.05 OrthoFinder output from all 47 species
Cre01.g010864 ATPRFB, HCF109 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g09191 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Ehy_g09038 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.04 OrthoFinder output from all 47 species
Lfl_g12599 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.06 OrthoFinder output from all 47 species
MA_10437191g0010 ATPRFB, HCF109 PrfB-type translation peptide chain release factor 0.04 OrthoFinder output from all 47 species
Msp_g44375 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002336 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.06 OrthoFinder output from all 47 species
Solyc04g025290.4.1 ATPRFB, HCF109,... PrfB-type translation peptide chain release factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 319 426
IPR005139 PCRF 119 307
No external refs found!