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  5. Spa_g09446

Spa_g09446


Description : protease *(SPF) & original description: none


Gene families : OG0001045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09446

Target Alias Description ECC score Gene Family Method Actions
AT1G09730 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g21486 OTS2, ULP1C protease *(OTS) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23701 OTS2, ULP1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51143 No alias protease *(SPF) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22063 OTS1, ULP1D protease *(OTS) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.8 OTS2, ULP1C Probable ubiquitin-like-specific protease 2A... 0.02 OrthoFinder output from all 47 species
Dcu_g01742 OTS1, ULP1D protease *(OTS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09433 No alias protease *(SPF) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g11770.1 LOC_Os05g11770 protease (SPF) 0.04 OrthoFinder output from all 47 species
LOC_Os12g41380.1 OTS2, ULP1C,... protease (OTS) 0.02 OrthoFinder output from all 47 species
Lfl_g13233 No alias protease *(SPF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07153 OTS1, ULP1D protease *(OTS) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13848 No alias protease *(SPF) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025803 OTS1, ULP1D protease *(OTS) & original description: CDS=141-1787 0.03 OrthoFinder output from all 47 species
Smo404271 No alias Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Zm00001e028717_P001 Zm00001e028717 protease (SPF) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 323 516
No external refs found!