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  5. Spa_g09388

Spa_g09388


Description : cohesin cofactor *(WAPL) & original description: none


Gene families : OG0002929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09388
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00267550 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Als_g10189 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11536 No alias cohesin cofactor *(WAPL) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g27612 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G063200.1 Ceric.32G063200 cohesin cofactor *(WAPL) & original description:... 0.04 OrthoFinder output from all 47 species
Cre09.g406500 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g32930 No alias cohesin cofactor *(WAPL) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g23094 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04943 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g11280.1 No alias cohesin cofactor (WAPL) 0.05 OrthoFinder output from all 47 species
Ore_g18526 No alias cohesin cofactor *(WAPL) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11391 No alias cohesin cofactor *(WAPL) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52297 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004474_P004 Zm00001e004474 cohesin cofactor (WAPL) 0.02 OrthoFinder output from all 47 species
Zm00001e012602_P001 Zm00001e012602 cohesin cofactor (WAPL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022771 WAPL_C 214 702
No external refs found!