Spa_g09186

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g09186
Cluster	HCCA: Cluster_315

Target	Alias	Description	ECC score	Gene Family Method
AT1G05310	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene24083.t1	Aspi01Gene24083	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31936.t1	Aspi01Gene31936	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G037100.1	Ceric.13G037100	not classified & original description: pacid=50635930...	0.04	OrthoFinder output from all 47 species
Ceric.36G035900.1	Ceric.36G035900	pectin methylesterase & original description:...	0.04	OrthoFinder output from all 47 species
Pir_g52907	VGD1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g31349	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08646	No alias	pecTin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	2	287

External Links

No external refs found!