Spa_g09142

Description : regulatory GTPase (NOG1) of LSU processome & original description: none

Gene families : OG0004754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004754_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g09142

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00241220	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AMTR_s00032p00058660	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Aev_g12809	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Aob_g02108	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Aop_g01799	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.05	OrthoFinder output from all 47 species
Cba_g68683	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021432.35	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dde_g18132	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.05	OrthoFinder output from all 47 species
Ehy_g11193	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.04	OrthoFinder output from all 47 species
Lfl_g02079	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.04	OrthoFinder output from all 47 species
Nbi_g11011	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Pir_g05601	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Ppi_g31063	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Sam_g12622	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.04	OrthoFinder output from all 47 species
Solyc01g081010.4.1	Solyc01g081010	NOG1 LSU processome regulatory GTPase	0.03	OrthoFinder output from all 47 species
Tin_g04665	No alias	regulatory GTPase (NOG1) of LSU processome & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012973	NOG_C	410	463
IPR010674	NOG1_Rossman_fold_dom	235	292
IPR041623	NOG1_N	6	165

External Links

No external refs found!

Spa_g09142

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation