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  5. Spa_g09084

Spa_g09084 (SDH1-1)


Aliases : SDH1-1

Description : EC_1.3 oxidoreductase acting on CH-CH group of donor & original description: none


Gene families : OG0003596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09084

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00054360 SDH1-1,... Cellular respiration.tricarboxylic acid cycle.succinate... 0.04 OrthoFinder output from all 47 species
Aev_g12388 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Dde_g08253 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
LOC_Os07g04240.1 SDH1-1, LOC_Os07g04240 flavoprotein component SDH1 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
Sam_g30148 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Tin_g16793 SDH1-1 EC_1.3 oxidoreductase acTing on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 499 630
IPR003953 FAD-binding_2 47 443
No external refs found!