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  5. Spa_g08987

Spa_g08987 (ATLEUC1, IIL1)


Aliases : ATLEUC1, IIL1

Description : large subunit of methylthioalkylmalate isomerase & original description: none


Gene families : OG0002600 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08987

Target Alias Description ECC score Gene Family Method Actions
AT4G13430 ATLEUC1, IIL1 isopropyl malate isomerase large subunit 1 0.03 OrthoFinder output from all 47 species
Aob_g08853 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Aob_g17147 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.02 OrthoFinder output from all 47 species
Aop_g26472 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Nbi_g08191 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 131 541
No external refs found!