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  5. Spa_g08951

Spa_g08951


Description : E4 polyubiquitination factor *(UAP) & original description: none


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08951

Target Alias Description ECC score Gene Family Method Actions
Ceric.12G093800.1 Ceric.12G093800 E4 polyubiquitination factor *(UAP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g02201 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24398 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g19334 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28508 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_7362g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g11663 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10836 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07652 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 460 503
No external refs found!