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  5. Spa_g08868

Spa_g08868 (FLN1)


Aliases : FLN1

Description : cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1) & original description: none


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Spa_g08868

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00193780 FLN1,... Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G54090 FLN1 fructokinase-like 1 0.04 OrthoFinder output from all 47 species
Aspi01Gene38593.t1 FLN1, Aspi01Gene38593 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Ceric.1Z102700.1 FLN1, Ceric.1Z102700 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Len_g15047 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Mp7g17740.1 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Ppi_g61036 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.02 OrthoFinder output from all 47 species
Sam_g27490 No alias cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.05 OrthoFinder output from all 47 species
Solyc09g011850.4.1 FLN1, Solyc09g011850 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 92 440
No external refs found!