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  5. Spa_g08839

Spa_g08839 (CDC73, PHP)


Aliases : CDC73, PHP

Description : component *(CDC73/PHP) of PAF1C transcription initiation and elongation complex & original description: none


Gene families : OG0005658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08839

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272130 CDC73, PHP,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Aev_g05238 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Aop_g12777 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Ceric.14G052600.1 CDC73, PHP,... component *(CDC73/PHP) of PAF1C transcription initiation... 0.05 OrthoFinder output from all 47 species
Dde_g12834 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Ehy_g03754 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
LOC_Os03g46190.1 CDC73, PHP,... component CDC73/PHP of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Lfl_g04658 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
MA_6793g0020 CDC73, PHP component CDC73/PHP of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Pir_g10744 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR031336 CDC73_C 316 467
IPR032041 Cdc73_N 2 150
No external refs found!