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  5. Spa_g08439

Spa_g08439


Description : not classified & original description: none


Gene families : OG0004684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004684_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08439

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00192630 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT2G25730 No alias unknown protein; Has 157 Blast hits to 144 proteins in... 0.05 OrthoFinder output from all 47 species
Ala_g07096 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g10942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z229800.1 Ceric.1Z229800 not classified & original description: pacid=50637151... 0.13 OrthoFinder output from all 47 species
Dac_g12550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g40990.2 LOC_Os01g40990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426096g0020 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10429924g0040 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_350854g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_99199g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g19740.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Nbi_g12888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002240 No alias not classified & original description: CDS=107-7096 0.05 OrthoFinder output from all 47 species
Smo443317 No alias Disease resistance response protein 206 OS=Pisum sativum 0.06 OrthoFinder output from all 47 species
Solyc08g068010.2.1 Solyc08g068010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020594_P001 Zm00001e020594 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!