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  5. Spa_g08360

Spa_g08360


Description : histone H3 variant *(CENH3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08360

Target Alias Description ECC score Gene Family Method Actions
Ala_g01156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23279 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01931.t1 Aspi01Gene01931 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02052.t1 Aspi01Gene02052 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14635.t1 Aspi01Gene14635 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02423 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G051800.1 Ceric.14G051800 not classified & original description: pacid=50634871... 0.03 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g07730.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Msp_g17199 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41010 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05547 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07788 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07789 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g14563 No alias histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22408 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g43939 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 41 156
No external refs found!