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  5. Spa_g08308

Spa_g08308


Description : not classified & original description: none


Gene families : OG0008308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08308
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Ala_g13558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0108.g045262 No alias not classified & original description: CDS=1-816 0.03 OrthoFinder output from all 47 species
Cba_g25764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04260 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR018962 DUF1995 69 274
No external refs found!