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  5. Spa_g08300

Spa_g08300


Description : not classified & original description: none


Gene families : OG0001071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00248120 evm_27.TU.AmTr_v1... Uncharacterized TPR repeat-containing protein At1g05150... 0.03 OrthoFinder output from all 47 species
Dcu_g01881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g09720.1 No alias Uncharacterized TPR repeat-containing protein At1g05150... 0.02 OrthoFinder output from all 47 species
Msp_g08410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007314 No alias not classified & original description: CDS=1-2406 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 384 417
No external refs found!