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  5. Spa_g08292

Spa_g08292 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08292
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Adi_g018200 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035344 AFB2 not classified & original description: CDS=10-1980 0.03 OrthoFinder output from all 47 species
Ceric.01G096900.1 AFB2, Ceric.01G096900 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.11G069600.1 COI1, Ceric.11G069600 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Dac_g00946 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Len_g15985 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g06163 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_78902g0010 AFB5 component TIR1/AFB of auxin receptor complex 0.04 OrthoFinder output from all 47 species
Msp_g15130 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Nbi_g04893 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Pnu_g20969 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004038 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010765 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Sam_g24051 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Spa_g50974 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 161 180
IPR041567 COI1_F-box 16 54
IPR041101 Transp_inhibit 73 119
No external refs found!