Spa_g08291


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08291
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13290 EMB2279, EMB88 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 458 506
IPR002885 Pentatricopeptide_repeat 214 257
IPR002885 Pentatricopeptide_repeat 377 437
IPR002885 Pentatricopeptide_repeat 305 353
No external refs found!