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  5. Spa_g08139

Spa_g08139


Description : not classified & original description: none


Gene families : OG0011726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08139

Target Alias Description ECC score Gene Family Method Actions
Adi_g015292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13982 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0074.g037453 No alias not classified & original description: CDS=1-2481 0.04 OrthoFinder output from all 47 species
Ceric.36G054500.1 Ceric.36G054500 not classified & original description: pacid=50568462... 0.03 OrthoFinder output from all 47 species
Dde_g09936 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g13979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007478 No alias not classified & original description: CDS=1-2787 0.04 OrthoFinder output from all 47 species
Tin_g16988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 394 440
IPR002885 Pentatricopeptide_repeat 192 238
IPR002885 Pentatricopeptide_repeat 495 542
IPR002885 Pentatricopeptide_repeat 788 835
IPR002885 Pentatricopeptide_repeat 91 137
IPR002885 Pentatricopeptide_repeat 688 735
IPR002885 Pentatricopeptide_repeat 295 322
IPR002885 Pentatricopeptide_repeat 964 988
IPR002885 Pentatricopeptide_repeat 893 921
IPR002885 Pentatricopeptide_repeat 469 494
IPR002885 Pentatricopeptide_repeat 166 191
No external refs found!