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  5. Spa_g08077

Spa_g08077 (CHMP1A, VPS46.2)


Aliases : CHMP1A, VPS46.2

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: none


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08077
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00206680 CHMP1A, VPS46.2,... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Ala_g00917 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08996.t1 CHMP1A, VPS46.2,... associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.03 OrthoFinder output from all 47 species
Dcu_g46536 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.01 OrthoFinder output from all 47 species
Mp3g15320.1 CHMP1A, VPS46.2 VPS46/CHMP1 associated protein of ESCRT-III complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 11 174
No external refs found!